HORDB

ID: hor002721
Uniprot ID: F5XVF1
Protein name: Ci-LF-6
Gene name: ci-lf
Organism: Ciona intestinalis (Transparent sea squirt) (Ascidia intestinalis)
Family: NA
Source: animal
Expression: NA
Disease: NA
Comments: NA
Taxonomy: Ciona (genus), Cionidae (family), Phlebobranchia (order), Ascidiacea (class), Tunicata (subphylum), Chordata (phylum), Deuterostomia, Bilateria, Eumetazoa, Metazoa (kingdom), Opisthokonta, Eukaryota (superkingdom), cellular organisms
GO MF: NA
GO BP: NA
GO CC: NA

Sequence: SDARLQGLF
Length: 9(180-188)
Propeptide: MKLVKSFSILAAFVVCYFGCIADAVPVDTVEKQLLRREGTGNPENFLDWTNQLNSTDVDEPDEELYDQLLYNILIPMQQKMIAEENGQLDNAEDNPFLAENRNSDEENNDYSPGQAESIQSDKRFQSLFKRYPGFQGLFKRHNPHLPDLFKRYNSMGLFKRSPGMLGLFKRGLLGLFKRSDARLQGLFKRDSATQGSFKRSSEAQALPKRYPNFQGLFKRLSEATEYPEDDSSNDDTKQRGNLHSLFKRDTSAHY
Signal peptide: MKLVKSFSILAAFVVCYFGCIADA
Modification: NA
Glycosylation: NA
Mutagenesis: NA

Function: NA
Mechanism: The sequence shown here is derived from an EMBL/GenBank/DDBJ third party annotation (TPA) entry.
Cross BBB: NA
Target: NA
Target Unid: NA
IC50: NA
EC50: NA
ED50: NA
kd: NA
Half life: NA

Structure: (PDB_ID-from https://www.rcsb.org/; AlphaFold_DB_ID-from https://alphafold.ebi.ac.uk/; hordbxxxxxx_AF2.pdb was predicted structure by AlphaFold2; hordbxxxxxx_ESM.pdb was predicted structure by ESMFold)

hor002721_AF2.pdb

hor002721_ESM.pdb

Mass:	114901	Formula:	C44H71N13O14
Absent amino acids:	CEHIKMNPTVWY	Common amino acids:	L
pI:	6.34	Basic residues:	1
Polar residues:	2	Hydrophobic residues:	4
Hydrophobicity:	-5.56	Boman Index:	-1701
Half-Life:	1.9 hour	Half-Life Yeast:	>20 hour
Half-Life E.Coli:	>10 hour	Aliphatic Index	97.78
Instability Index:	4511.11	Extinction Coefficient cystines:	0
Absorbance 280nm:	0

PubMed ID: 21467196
Title: Peptidomic Analysis of the Central Nervous System of the Protochordate, Ciona Intestinalis: Homologs and Prototypes of Vertebrate Peptides and Novel Peptides